STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lboz_2452Putative globin-like protein. (159 aa)    
Predicted Functional Partners:
Lboz_2451
Hypothetical protein.
       0.800
Lboz_2454
Transcriptional regulator.
  
    0.784
Lboz_2453
uroporphyrin-III C- methyltransferase.
       0.781
Lboz_3196
Methyltransferase involved in chemotaxis (CheR domain).
    
  0.664
Lboz_0656
Chemotaxis histidine kinase.
    
  0.661
Lboz_3600
Sensory box histidine kinase/response regulator.
    
  0.621
cydA
Cytochrome d ubiquinol oxidase subunit I.
       0.596
cydB
Cytochrome d ubiquinol oxidase subunit II.
       0.593
Lboz_2455
Glycine-rich protein.
       0.519
Lboz_1415
Radical SAM superfamily protein.
  
     0.439
Your Current Organism:
Fluoribacter bozemanae
NCBI taxonomy Id: 447
Other names: ATCC 33217, CIP 103872, DSM 16523, F. bozemanae, Fluoribacter bozemaniae, Legionella bozemaniae, Legionella bozemanii, NCTC 11368, strain ALLO1, strain WIGA
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