STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yjbJStress response protein; Belongs to the UPF0337 (CsbD) family. (67 aa)    
Predicted Functional Partners:
Lboz_2762
Lipoprotein.
 
  
 0.904
Lboz_3278
Transmembrane protein.
 
    0.865
Lboz_0860
Transmembrane protein.
  
    0.790
Lboz_2501
PRC-barrel domain protein.
 
     0.749
Lboz_0857
Hypothetical protein.
   
    0.727
Lboz_2506
Transmembrane protein.
  
    0.700
Lboz_3159
Transmembrane protein.
  
    0.700
Lboz_0185
Acetyltransferase.
   
    0.688
Lboz_2502
Hypothetical protein.
       0.681
Lboz_1761
Phospholipid binding protein.
  
    0.589
Your Current Organism:
Fluoribacter bozemanae
NCBI taxonomy Id: 447
Other names: ATCC 33217, CIP 103872, DSM 16523, F. bozemanae, Fluoribacter bozemaniae, Legionella bozemaniae, Legionella bozemanii, NCTC 11368, strain ALLO1, strain WIGA
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.