STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lboz_2605Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system. (85 aa)    
Predicted Functional Partners:
fitB
Toxin FitB.
 
   
 0.962
higB_2
Toxin higB-2.
 
 
 
 0.679
higB_1
Toxin higB-2.
 
 
 
 0.669
Lboz_1839
Hypothetical protein.
   
 
 0.625
Lboz_2310
Hypothetical protein.
   
 
 0.625
Lboz_3118
Hypothetical protein.
   
 
 0.625
relE
Toxin of the RelE-RelB toxin-antitoxin system.
   
 
 0.625
Lboz_3485
Hypothetical protein.
   
 
 0.625
Lboz_2607
GNAT family acetyltransferase.
       0.498
yfgD
Oxidoreductase.
       0.407
Your Current Organism:
Fluoribacter bozemanae
NCBI taxonomy Id: 447
Other names: ATCC 33217, CIP 103872, DSM 16523, F. bozemanae, Fluoribacter bozemaniae, Legionella bozemaniae, Legionella bozemanii, NCTC 11368, strain ALLO1, strain WIGA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.