Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lboz_3000Putative conjugative transfer protein TraF. (262 aa)    
Predicted Functional Partners:
Lboz_3001
Conjugal transfer mating pair stabilization protein TraN.
 
     0.950
Lboz_3005
Putative conjugative transfer protein TraW.
 
     0.889
Lboz_3004
Putative conjugative transfer protein TraU.
 
     0.884
msrA_1
Bifunctional methionine sulfoxide reductase B/A protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.813
Lboz_2999
Putative conjugative transfer protein TrbB.
       0.780
Lboz_1799
Protein TraG.
 
     0.777
traH_1
Protein TraH.
 
     0.777
Lboz_1805
Protein TraU.
 
     0.777
Lboz_1808
Protein TraC.
 
     0.777
Lboz_2973
Putative sex pilus assembly and mating pair protein TraG.
 
     0.777
Your Current Organism:
Fluoribacter bozemanae
NCBI taxonomy Id: 447
Other names: ATCC 33217, CIP 103872, DSM 16523, F. bozemanae, Fluoribacter bozemaniae, Legionella bozemaniae, Legionella bozemanii, NCTC 11368, strain ALLO1, strain WIGA
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.