STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lboz_3211Transmembrane protein. (300 aa)    
Predicted Functional Partners:
Lboz_3212
Hypothetical protein.
       0.636
Lboz_3210
AraC family transcriptional regulator.
       0.622
rtcB
Replication factor C subunit (activator I); Belongs to the RtcB family.
       0.556
Lboz_3209
Hypothetical protein.
       0.454
Lboz_2519
Zinc-iron permease (ZIP) family metal cation transporter.
  
    0.443
Lboz_0157
Acid sphingomyelinase-like phosphodiesterase.
  
     0.429
Lboz_1011
Protein IcmE (DotG).
 
    0.429
Lboz_3314
Transmembrane protein.
  
    0.404
Lboz_1016
Protein IcmO (DotL).
  
     0.403
Lboz_0372
IcmF.
  
     0.400
Your Current Organism:
Fluoribacter bozemanae
NCBI taxonomy Id: 447
Other names: ATCC 33217, CIP 103872, DSM 16523, F. bozemanae, Fluoribacter bozemaniae, Legionella bozemaniae, Legionella bozemanii, NCTC 11368, strain ALLO1, strain WIGA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.