STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lboz_3262Arginine-binding periplasmic protein. (82 aa)    
Predicted Functional Partners:
Lboz_1367
Sensory box histidine kinase/response regulator.
   
 0.778
Lboz_2549
Sensory histidine-kinase / response regulator.
   
 0.778
Lboz_3196
Methyltransferase involved in chemotaxis (CheR domain).
    
 0.730
letS_2
Legionella transmission sensor LetS.
   
 0.707
letS_1
Legionella transmission sensor LetS.
    
 0.677
Lboz_3263
Arginine-binding periplasmic protein.
      0.675
Lboz_0656
Chemotaxis histidine kinase.
    
 0.645
Lboz_3261
Hypothetical protein.
       0.606
Lboz_3200
Sensory histidine kinase CreC.
 
  
  0.585
yecS
Transporter subunit: permease component of ABC superfamily transporter.
 
 0.571
Your Current Organism:
Fluoribacter bozemanae
NCBI taxonomy Id: 447
Other names: ATCC 33217, CIP 103872, DSM 16523, F. bozemanae, Fluoribacter bozemaniae, Legionella bozemaniae, Legionella bozemanii, NCTC 11368, strain ALLO1, strain WIGA
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