Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HCBG_00641 | HCBG_01965 | C0NBZ5 | C0NDM2 | Transcription initiation factor TFIID subunit 5. | Uncharacterized protein. | 0.584 |
HCBG_00641 | HCBG_02231 | C0NBZ5 | C0NIH4 | Transcription initiation factor TFIID subunit 5. | BZIP domain-containing protein. | 0.710 |
HCBG_00641 | HCBG_04515 | C0NBZ5 | C0NLY5 | Transcription initiation factor TFIID subunit 5. | SCA7 domain-containing protein. | 0.994 |
HCBG_00641 | HCBG_06400 | C0NBZ5 | C0NTC0 | Transcription initiation factor TFIID subunit 5. | Uncharacterized protein; Belongs to the PI3/PI4-kinase family. | 0.995 |
HCBG_00641 | HCBG_07404 | C0NBZ5 | C0NW74 | Transcription initiation factor TFIID subunit 5. | Ubiquitin. | 0.710 |
HCBG_00641 | HCBG_07719 | C0NBZ5 | C0NXS5 | Transcription initiation factor TFIID subunit 5. | Transcription initiation factor TFIID subunit 12. | 0.999 |
HCBG_01637 | HCBG_01965 | C0NFH1 | C0NDM2 | Serine/threonine-protein kinase Tel1; Serine/threonine protein kinase which activates checkpoint signaling upon genotoxic stresses such as ionizing radiation (IR), ultraviolet light (UV), or DNA replication stalling, thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates histone H2A to form H2AS128ph (gamma-H2A) at sites of DNA damage, involved in the regulation of DNA damage response mechanism. Required for the control of telomere length and genome stability; Belongs to the PI3/PI4-kinase family. ATM subfamily. | Uncharacterized protein. | 0.583 |
HCBG_01637 | HCBG_06400 | C0NFH1 | C0NTC0 | Serine/threonine-protein kinase Tel1; Serine/threonine protein kinase which activates checkpoint signaling upon genotoxic stresses such as ionizing radiation (IR), ultraviolet light (UV), or DNA replication stalling, thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates histone H2A to form H2AS128ph (gamma-H2A) at sites of DNA damage, involved in the regulation of DNA damage response mechanism. Required for the control of telomere length and genome stability; Belongs to the PI3/PI4-kinase family. ATM subfamily. | Uncharacterized protein; Belongs to the PI3/PI4-kinase family. | 0.495 |
HCBG_01965 | HCBG_00641 | C0NDM2 | C0NBZ5 | Uncharacterized protein. | Transcription initiation factor TFIID subunit 5. | 0.584 |
HCBG_01965 | HCBG_01637 | C0NDM2 | C0NFH1 | Uncharacterized protein. | Serine/threonine-protein kinase Tel1; Serine/threonine protein kinase which activates checkpoint signaling upon genotoxic stresses such as ionizing radiation (IR), ultraviolet light (UV), or DNA replication stalling, thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates histone H2A to form H2AS128ph (gamma-H2A) at sites of DNA damage, involved in the regulation of DNA damage response mechanism. Required for the control of telomere length and genome stability; Belongs to the PI3/PI4-kinase family. ATM subfamily. | 0.583 |
HCBG_01965 | HCBG_02231 | C0NDM2 | C0NIH4 | Uncharacterized protein. | BZIP domain-containing protein. | 0.552 |
HCBG_01965 | HCBG_03777 | C0NDM2 | C0NKU7 | Uncharacterized protein. | Uncharacterized protein. | 0.617 |
HCBG_01965 | HCBG_04515 | C0NDM2 | C0NLY5 | Uncharacterized protein. | SCA7 domain-containing protein. | 0.546 |
HCBG_01965 | HCBG_06400 | C0NDM2 | C0NTC0 | Uncharacterized protein. | Uncharacterized protein; Belongs to the PI3/PI4-kinase family. | 0.550 |
HCBG_01965 | HCBG_07404 | C0NDM2 | C0NW74 | Uncharacterized protein. | Ubiquitin. | 0.552 |
HCBG_01965 | HCBG_07517 | C0NDM2 | C0NWI7 | Uncharacterized protein. | Telomere-binding alpha subunit central domain-containing protein. | 0.606 |
HCBG_01965 | HCBG_07693 | C0NDM2 | C0NXP9 | Uncharacterized protein. | WD domain-containing protein. | 0.624 |
HCBG_01965 | HCBG_07719 | C0NDM2 | C0NXS5 | Uncharacterized protein. | Transcription initiation factor TFIID subunit 12. | 0.553 |
HCBG_02231 | HCBG_00641 | C0NIH4 | C0NBZ5 | BZIP domain-containing protein. | Transcription initiation factor TFIID subunit 5. | 0.710 |
HCBG_02231 | HCBG_01965 | C0NIH4 | C0NDM2 | BZIP domain-containing protein. | Uncharacterized protein. | 0.552 |
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