STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCBG_03441YTH domain-containing protein. (805 aa)    
Predicted Functional Partners:
HCBG_02512
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.966
HCBG_04802
CPSF_A domain-containing protein.
    
 0.962
HCBG_06329
Cleavage and polyadenylation specific factor 5.
    
 
 0.919
HCBG_06689
mRNA 3'-end-processing protein rna14.
    
 
 0.909
CLP1
mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.
    
 
 0.811
HCBG_01246
Endoribonuclease ysh1.
    
 0.792
HCBG_09195
Retinoblastoma-binding protein.
   
 0.714
HCBG_07935
Uncharacterized protein.
   
 
 0.699
HCBG_08722
U1 snRNP-associated protein Usp107.
   
    0.650
HCBG_04584
Polyadenylation factor subunit 2.
    
  0.646
Your Current Organism:
Histoplasma capsulatum G186AR
NCBI taxonomy Id: 447093
Other names: Ajellomyces capsulatus G186AR, H. capsulatum G186AR
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.