Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HCBG_01884 | HCBG_04725 | C0NG68 | C0NNJ5 | Peroxisomal targeting signal-1 receptor. | Short-chain dehydrogenase. | 0.583 |
HCBG_01884 | HCBG_07163 | C0NG68 | C0NVI3 | Peroxisomal targeting signal-1 receptor. | Acetoacetyl-CoA reductase. | 0.906 |
HCBG_01884 | HCBG_07453 | C0NG68 | C0NWC3 | Peroxisomal targeting signal-1 receptor. | Peroxin 12. | 0.995 |
HCBG_02209 | HCBG_04514 | C0NIF2 | C0NLY4 | Malonyl CoA-acyl carrier protein transacylase. | 3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.998 |
HCBG_02209 | HCBG_04725 | C0NIF2 | C0NNJ5 | Malonyl CoA-acyl carrier protein transacylase. | Short-chain dehydrogenase. | 0.604 |
HCBG_02209 | HCBG_07163 | C0NIF2 | C0NVI3 | Malonyl CoA-acyl carrier protein transacylase. | Acetoacetyl-CoA reductase. | 0.563 |
HCBG_04243 | HCBG_04325 | C0NNB6 | C0NLE5 | Metallo-beta-lactamase. | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | 0.809 |
HCBG_04243 | HCBG_04725 | C0NNB6 | C0NNJ5 | Metallo-beta-lactamase. | Short-chain dehydrogenase. | 0.630 |
HCBG_04325 | HCBG_04243 | C0NLE5 | C0NNB6 | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | Metallo-beta-lactamase. | 0.809 |
HCBG_04325 | HCBG_04514 | C0NLE5 | C0NLY4 | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | 3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.518 |
HCBG_04325 | HCBG_04725 | C0NLE5 | C0NNJ5 | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | Short-chain dehydrogenase. | 0.597 |
HCBG_04325 | HCBG_06547 | C0NLE5 | C0NTR7 | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | 2Fe-2S iron-sulfur cluster binding domain-containing protein. | 0.809 |
HCBG_04325 | HCBG_07163 | C0NLE5 | C0NVI3 | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | Acetoacetyl-CoA reductase. | 0.484 |
HCBG_04514 | HCBG_02209 | C0NLY4 | C0NIF2 | 3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Malonyl CoA-acyl carrier protein transacylase. | 0.998 |
HCBG_04514 | HCBG_04325 | C0NLY4 | C0NLE5 | 3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | 0.518 |
HCBG_04514 | HCBG_04725 | C0NLY4 | C0NNJ5 | 3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Short-chain dehydrogenase. | 0.595 |
HCBG_04514 | HCBG_07163 | C0NLY4 | C0NVI3 | 3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Acetoacetyl-CoA reductase. | 0.587 |
HCBG_04514 | HCBG_08273 | C0NLY4 | C0NYP3 | 3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 3-hydroxybutyryl CoA dehydrogenase. | 0.431 |
HCBG_04725 | HCBG_01884 | C0NNJ5 | C0NG68 | Short-chain dehydrogenase. | Peroxisomal targeting signal-1 receptor. | 0.583 |
HCBG_04725 | HCBG_02209 | C0NNJ5 | C0NIF2 | Short-chain dehydrogenase. | Malonyl CoA-acyl carrier protein transacylase. | 0.604 |
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