STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCBG_06908SCF E3 ubiquitin ligase complex F-box protein grrA. (592 aa)    
Predicted Functional Partners:
HCBG_02109
Uncharacterized protein; Belongs to the SKP1 family.
   
 0.991
HCBG_05551
Cullin; Belongs to the cullin family.
    
 0.977
HCBG_03661
Uncharacterized protein.
   
 0.970
HCBG_06063
Cullin; Belongs to the cullin family.
    
 0.939
HCBG_01917
Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 
 0.937
HCBG_02147
RING-box protein HRT1.
    
 0.931
HCBG_05865
Serine/threonine-protein phosphatase.
    
 
 0.892
HCBG_02728
Cell division control protein.
    
 0.855
HCBG_01057
Sulfur metabolite repression control protein.
    
 0.812
HCBG_01103
F-box and WD repeat-containing protein.
    
 0.805
Your Current Organism:
Histoplasma capsulatum G186AR
NCBI taxonomy Id: 447093
Other names: Ajellomyces capsulatus G186AR, H. capsulatum G186AR
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