STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCBG_06798PHD finger containing protein Phf1. (588 aa)    
Predicted Functional Partners:
HCBG_06457
Chromatin assembly factor 1 subunit C.
   
 0.946
HCBG_06506
Uncharacterized protein.
    
 0.920
HCBG_08844
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.812
HCBG_02512
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.763
HCBG_01246
Endoribonuclease ysh1.
   
 0.731
HCBG_06100
DNA-directed RNA polymerase II polypeptide.
   
  0.725
HCBG_00794
Uncharacterized protein.
   
 0.714
HCBG_05939
Goodbye domain-containing protein.
   
 0.714
HCBG_08991
DNA cross-link repair protein pso2/snm1.
   
 0.714
HCBG_04568
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
  0.706
Your Current Organism:
Histoplasma capsulatum G186AR
NCBI taxonomy Id: 447093
Other names: Ajellomyces capsulatus G186AR, H. capsulatum G186AR
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.