AMD88890.1 protein (Desulfovibrio fairfieldensis)

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[Homology]

Score

AMD88890.1

Heavy metal resistance protein CzcA; Derived by automated computational analysis using gene prediction method: Protein Homology. (233 aa)

Predicted Functional Partners:

AMD90348.1

0.778

rpoB

0.655

rpoA

0.640

rpoC

0.634

rpoZ

0.615

AMD89606.1

0.600

rpoD

0.600

AMD91424.1

0.591

AMD88980.1

0.568

AMD89646.1

0.551

Your Current Organism:

Desulfovibrio fairfieldensis

NCBI taxonomy Id: 44742
Other names: ATCC 70045, D. fairfieldensis, strain FH26001/95

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... functional annotations:

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMD88890.1	AMD88980.1	AXF13_01455	AXF13_01965	Heavy metal resistance protein CzcA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.568
AMD88890.1	AMD89606.1	AXF13_01455	AXF13_05475	Heavy metal resistance protein CzcA; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase subunit sigma-70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.600
AMD88890.1	AMD89646.1	AXF13_01455	AXF13_05690	Heavy metal resistance protein CzcA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sodium:sulfate symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.551
AMD88890.1	AMD90348.1	AXF13_01455	AXF13_09580	Heavy metal resistance protein CzcA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Guanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.778
AMD88890.1	AMD91424.1	AXF13_01455	AXF13_15525	Heavy metal resistance protein CzcA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.591
AMD88890.1	rpoA	AXF13_01455	AXF13_09950	Heavy metal resistance protein CzcA; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.640
AMD88890.1	rpoB	AXF13_01455	AXF13_03710	Heavy metal resistance protein CzcA; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.655
AMD88890.1	rpoC	AXF13_01455	AXF13_03705	Heavy metal resistance protein CzcA; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.634
AMD88890.1	rpoD	AXF13_01455	AXF13_07500	Heavy metal resistance protein CzcA; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase subunit sigma-70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.600
AMD88890.1	rpoZ	AXF13_01455	AXF13_11375	Heavy metal resistance protein CzcA; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.615
AMD88980.1	AMD88890.1	AXF13_01965	AXF13_01455	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Heavy metal resistance protein CzcA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.568
AMD88980.1	AMD89606.1	AXF13_01965	AXF13_05475	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase subunit sigma-70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.438
AMD88980.1	AMD90348.1	AXF13_01965	AXF13_09580	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Guanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.792
AMD88980.1	AMD91424.1	AXF13_01965	AXF13_15525	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.986
AMD88980.1	rpoB	AXF13_01965	AXF13_03710	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.409
AMD88980.1	rpoD	AXF13_01965	AXF13_07500	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase subunit sigma-70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.438
AMD89606.1	AMD88890.1	AXF13_05475	AXF13_01455	RNA polymerase subunit sigma-70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Heavy metal resistance protein CzcA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.600
AMD89606.1	AMD88980.1	AXF13_05475	AXF13_01965	RNA polymerase subunit sigma-70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.438
AMD89606.1	AMD91424.1	AXF13_05475	AXF13_15525	RNA polymerase subunit sigma-70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.622
AMD89606.1	rpoA	AXF13_05475	AXF13_09950	RNA polymerase subunit sigma-70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.859