AMD89177.1 protein (Desulfovibrio fairfieldensis)

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Predicted Interactions

gene neighborhood

gene fusions

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textmining

co-expression

protein homology

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[Homology]

Score

AMD89177.1

DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (619 aa)

Predicted Functional Partners:

AMD91417.1

0.914

AMD90864.1

0.912

AMD91612.1

0.911

AMD89097.1

0.900

AMD91416.1

0.900

AMD89702.1

0.760

AMD89178.1

0.423

Your Current Organism:

Desulfovibrio fairfieldensis

NCBI taxonomy Id: 44742
Other names: ATCC 70045, D. fairfieldensis, strain FH26001/95

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMD89097.1	AMD89177.1	AXF13_02645	AXF13_03080	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
AMD89097.1	AMD90864.1	AXF13_02645	AXF13_12435	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.932
AMD89097.1	AMD91416.1	AXF13_02645	AXF13_15480	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.931
AMD89097.1	AMD91417.1	AXF13_02645	AXF13_15485	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding response regulator in two-component regulatory system with ZraS; response regulator/sigma54 interaction protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.944
AMD89097.1	AMD91612.1	AXF13_02645	AXF13_12430	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding response regulator in two-component regulatory system with ZraS; response regulator/sigma54 interaction protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.939
AMD89177.1	AMD89097.1	AXF13_03080	AXF13_02645	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
AMD89177.1	AMD89178.1	AXF13_03080	AXF13_03085	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.423
AMD89177.1	AMD89702.1	AXF13_03080	AXF13_06010	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.760
AMD89177.1	AMD90864.1	AXF13_03080	AXF13_12435	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.912
AMD89177.1	AMD91416.1	AXF13_03080	AXF13_15480	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
AMD89177.1	AMD91417.1	AXF13_03080	AXF13_15485	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding response regulator in two-component regulatory system with ZraS; response regulator/sigma54 interaction protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.914
AMD89177.1	AMD91612.1	AXF13_03080	AXF13_12430	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding response regulator in two-component regulatory system with ZraS; response regulator/sigma54 interaction protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.911
AMD89178.1	AMD89177.1	AXF13_03085	AXF13_03080	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.423
AMD89702.1	AMD89177.1	AXF13_06010	AXF13_03080	RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.760
AMD89702.1	AMD91417.1	AXF13_06010	AXF13_15485	RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-binding response regulator in two-component regulatory system with ZraS; response regulator/sigma54 interaction protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.713
AMD89702.1	AMD91612.1	AXF13_06010	AXF13_12430	RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-binding response regulator in two-component regulatory system with ZraS; response regulator/sigma54 interaction protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.731
AMD90864.1	AMD89097.1	AXF13_12435	AXF13_02645	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.932
AMD90864.1	AMD89177.1	AXF13_12435	AXF13_03080	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.912
AMD90864.1	AMD91416.1	AXF13_12435	AXF13_15480	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.924
AMD90864.1	AMD91417.1	AXF13_12435	AXF13_15485	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding response regulator in two-component regulatory system with ZraS; response regulator/sigma54 interaction protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.977