Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMD91024.1 | sfsA | AXF13_13325 | AXF13_13330 | phenylacetate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sugar fermentation stimulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SfsA family. | 0.468 |
AMD91025.1 | sfsA | AXF13_13335 | AXF13_13330 | Aspartate aminotransferase; Catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sugar fermentation stimulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SfsA family. | 0.505 |
AMD91617.1 | sfsA | AXF13_12910 | AXF13_13330 | A/G-specific adenine glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sugar fermentation stimulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SfsA family. | 0.403 |
proA | sfsA | AXF13_00950 | AXF13_13330 | Gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | Sugar fermentation stimulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SfsA family. | 0.590 |
sfsA | AMD91024.1 | AXF13_13330 | AXF13_13325 | Sugar fermentation stimulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SfsA family. | phenylacetate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.468 |
sfsA | AMD91025.1 | AXF13_13330 | AXF13_13335 | Sugar fermentation stimulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SfsA family. | Aspartate aminotransferase; Catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.505 |
sfsA | AMD91617.1 | AXF13_13330 | AXF13_12910 | Sugar fermentation stimulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SfsA family. | A/G-specific adenine glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.403 |
sfsA | proA | AXF13_13330 | AXF13_00950 | Sugar fermentation stimulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SfsA family. | Gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.590 |