STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB35806.1N-acetylmuramoyl-L-alanine amidase. (311 aa)    
Predicted Functional Partners:
SKB35670.1
Beta-glucosidase.
    
 0.853
SKB75553.1
Flagellum-specific peptidoglycan hydrolase FlgJ.
 
  
 0.809
SKB65898.1
Muramoyltetrapeptide carboxypeptidase.
     
 0.774
SKB35702.1
ROK family protein (putative glucokinase).
 
     0.773
SKB56305.1
Beta-glucosidase.
    
 0.759
SKB44808.1
ABC-type branched-chain amino acid transport system, substrate-binding protein.
    
 0.749
SKB35792.1
Glucosamine-6-phosphate deaminase.
 
     0.739
SKB35867.1
Hexosaminidase.
  
  
  0.737
SKB63867.1
Hexosaminidase.
  
  
  0.731
SKB89629.1
NlpC/P60 family protein.
  
 
 0.683
Your Current Organism:
Salegentibacter salinarum
NCBI taxonomy Id: 447422
Other names: CCUG 54354, DSM 23400, KCTC 12975, S. salinarum, Salegentibacter salinarum Yoon et al. 2008, strain ISL-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.