STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB54613.1CheY chemotaxis protein or a CheY-like REC (receiver) domain. (142 aa)    
Predicted Functional Partners:
SKB97022.1
PAS domain S-box-containing protein.
 
 0.998
SKB34827.1
PAS domain S-box-containing protein.
 
 0.995
SKB54555.1
PAS domain S-box-containing protein.
 
 0.993
SKB58760.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
 
 0.992
SKB59223.1
PAS domain S-box-containing protein.
 
 0.988
SKB53974.1
PAS domain S-box-containing protein.
 
 0.962
SKB50825.1
PAS domain S-box-containing protein.
 
 0.948
SKB38542.1
PAS fold-containing protein.
 
 0.930
SKB97004.1
PAS domain S-box-containing protein.
 
 0.929
SKB64487.1
AraC family transcriptional regulator; ABC-type sugar transport system, substrate-binding protein, contains N-terminal xre family HTH domain.
 
 
0.912
Your Current Organism:
Salegentibacter salinarum
NCBI taxonomy Id: 447422
Other names: CCUG 54354, DSM 23400, KCTC 12975, S. salinarum, Salegentibacter salinarum Yoon et al. 2008, strain ISL-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.