STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB67510.1Hypothetical protein. (360 aa)    
Predicted Functional Partners:
SKB80065.1
Repeat domain-containing protein.
  
     0.584
SKB80038.1
PAP2 superfamily protein.
 
     0.583
SKB67504.1
Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR.
 
     0.547
SKB96294.1
FG-GAP repeat-containing protein.
  
     0.541
SKB80052.1
Repeat domain-containing protein.
  
     0.520
SKB90941.1
NIPSNAP protein.
  
     0.517
SKB53883.1
Repeat domain-containing protein.
  
     0.504
SKB67497.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
       0.476
Your Current Organism:
Salegentibacter salinarum
NCBI taxonomy Id: 447422
Other names: CCUG 54354, DSM 23400, KCTC 12975, S. salinarum, Salegentibacter salinarum Yoon et al. 2008, strain ISL-4
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.