STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB67718.1Maltose alpha-D-glucosyltransferase/ alpha-amylase. (541 aa)    
Predicted Functional Partners:
SKB90894.1
Amino acid permease.
   
 0.914
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
 
 
 0.899
SKB80244.1
Trehalose 6-phosphate synthase/phosphatase.
 
 
 0.873
SKB61341.1
Maltose phosphorylase.
 
 
 0.851
SKB61426.1
Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.845
glgC
Glucose-1-phosphate adenylyltransferase.
 
 
 0.823
SKB61310.1
Alpha amylase, catalytic domain.
 
  
 
0.812
SKB67701.1
Probable non-F420 flavinoid oxidoreductase.
 
     0.775
SKB80577.1
Phosphomannomutase.
     
 0.762
SKB61359.1
Beta-phosphoglucomutase.
 
 
 0.720
Your Current Organism:
Salegentibacter salinarum
NCBI taxonomy Id: 447422
Other names: CCUG 54354, DSM 23400, KCTC 12975, S. salinarum, Salegentibacter salinarum Yoon et al. 2008, strain ISL-4
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