Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKB33529.1 | SKB34827.1 | SAMN05660903_00141 | SAMN05660903_00259 | Adenylate cyclase. | PAS domain S-box-containing protein. | 0.970 |
SKB33529.1 | SKB68285.1 | SAMN05660903_00141 | SAMN05660903_02039 | Adenylate cyclase. | CRP/FNR family transcriptional regulator, anaerobic regulatory protein. | 0.637 |
SKB34827.1 | SKB33529.1 | SAMN05660903_00259 | SAMN05660903_00141 | PAS domain S-box-containing protein. | Adenylate cyclase. | 0.970 |
SKB34827.1 | SKB68285.1 | SAMN05660903_00259 | SAMN05660903_02039 | PAS domain S-box-containing protein. | CRP/FNR family transcriptional regulator, anaerobic regulatory protein. | 0.732 |
SKB34827.1 | SKB75577.1 | SAMN05660903_00259 | SAMN05660903_02387 | PAS domain S-box-containing protein. | Glutamate synthase (ferredoxin). | 0.663 |
SKB68276.1 | SKB68285.1 | SAMN05660903_02038 | SAMN05660903_02039 | Hemolysin III. | CRP/FNR family transcriptional regulator, anaerobic regulatory protein. | 0.529 |
SKB68276.1 | SKB68295.1 | SAMN05660903_02038 | SAMN05660903_02040 | Hemolysin III. | Hypothetical protein. | 0.405 |
SKB68285.1 | SKB33529.1 | SAMN05660903_02039 | SAMN05660903_00141 | CRP/FNR family transcriptional regulator, anaerobic regulatory protein. | Adenylate cyclase. | 0.637 |
SKB68285.1 | SKB34827.1 | SAMN05660903_02039 | SAMN05660903_00259 | CRP/FNR family transcriptional regulator, anaerobic regulatory protein. | PAS domain S-box-containing protein. | 0.732 |
SKB68285.1 | SKB68276.1 | SAMN05660903_02039 | SAMN05660903_02038 | CRP/FNR family transcriptional regulator, anaerobic regulatory protein. | Hemolysin III. | 0.529 |
SKB68285.1 | SKB68295.1 | SAMN05660903_02039 | SAMN05660903_02040 | CRP/FNR family transcriptional regulator, anaerobic regulatory protein. | Hypothetical protein. | 0.657 |
SKB68285.1 | SKB75577.1 | SAMN05660903_02039 | SAMN05660903_02387 | CRP/FNR family transcriptional regulator, anaerobic regulatory protein. | Glutamate synthase (ferredoxin). | 0.836 |
SKB68285.1 | SKB87726.1 | SAMN05660903_02039 | SAMN05660903_03006 | CRP/FNR family transcriptional regulator, anaerobic regulatory protein. | RNA polymerase Rpb6; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.552 |
SKB68285.1 | SKB97888.1 | SAMN05660903_02039 | SAMN05660903_03610 | CRP/FNR family transcriptional regulator, anaerobic regulatory protein. | Glycerol uptake facilitator protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.533 |
SKB68285.1 | rpoA | SAMN05660903_02039 | SAMN05660903_01895 | CRP/FNR family transcriptional regulator, anaerobic regulatory protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.614 |
SKB68285.1 | rpoB | SAMN05660903_02039 | SAMN05660903_02513 | CRP/FNR family transcriptional regulator, anaerobic regulatory protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.607 |
SKB68285.1 | rpoC | SAMN05660903_02039 | SAMN05660903_02514 | CRP/FNR family transcriptional regulator, anaerobic regulatory protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.559 |
SKB68295.1 | SKB68276.1 | SAMN05660903_02040 | SAMN05660903_02038 | Hypothetical protein. | Hemolysin III. | 0.405 |
SKB68295.1 | SKB68285.1 | SAMN05660903_02040 | SAMN05660903_02039 | Hypothetical protein. | CRP/FNR family transcriptional regulator, anaerobic regulatory protein. | 0.657 |
SKB75577.1 | SKB34827.1 | SAMN05660903_02387 | SAMN05660903_00259 | Glutamate synthase (ferredoxin). | PAS domain S-box-containing protein. | 0.663 |
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