STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB68817.1Quaternary ammonium compound-resistance protein SugE. (108 aa)    
Predicted Functional Partners:
SKB68824.1
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase).
       0.783
SKB68831.1
Protein of unknown function.
       0.783
ubiA
4-hydroxybenzoate polyprenyltransferase.
       0.774
SKB68794.1
Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
       0.576
SKB68841.1
Cytochrome c-type biogenesis protein CcsB.
       0.572
SKB55882.1
Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family.
  
 
 0.462
SKB59375.1
Polysaccharide deacetylase.
  
 
 0.462
SKB76252.1
Polysaccharide deacetylase.
  
 
 0.462
SKB83216.1
Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family.
  
 
 0.462
SKB67746.1
Uncharacterized membrane protein.
    
  0.425
Your Current Organism:
Salegentibacter salinarum
NCBI taxonomy Id: 447422
Other names: CCUG 54354, DSM 23400, KCTC 12975, S. salinarum, Salegentibacter salinarum Yoon et al. 2008, strain ISL-4
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