Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKB68203.1 | SKB81844.1 | SAMN05660903_02030 | SAMN05660903_02701 | Hypothetical protein. | Hypothetical protein. | 0.533 |
SKB68203.1 | SKB81854.1 | SAMN05660903_02030 | SAMN05660903_02702 | Hypothetical protein. | Outer membrane receptor proteins, mostly Fe transport. | 0.493 |
SKB81831.1 | SKB81844.1 | SAMN05660903_02700 | SAMN05660903_02701 | Uncharacterized iron-regulated membrane protein. | Hypothetical protein. | 0.575 |
SKB81831.1 | SKB81854.1 | SAMN05660903_02700 | SAMN05660903_02702 | Uncharacterized iron-regulated membrane protein. | Outer membrane receptor proteins, mostly Fe transport. | 0.537 |
SKB81844.1 | SKB68203.1 | SAMN05660903_02701 | SAMN05660903_02030 | Hypothetical protein. | Hypothetical protein. | 0.533 |
SKB81844.1 | SKB81831.1 | SAMN05660903_02701 | SAMN05660903_02700 | Hypothetical protein. | Uncharacterized iron-regulated membrane protein. | 0.575 |
SKB81844.1 | SKB81854.1 | SAMN05660903_02701 | SAMN05660903_02702 | Hypothetical protein. | Outer membrane receptor proteins, mostly Fe transport. | 0.939 |
SKB81844.1 | SKB81863.1 | SAMN05660903_02701 | SAMN05660903_02703 | Hypothetical protein. | AraC-type DNA-binding protein. | 0.505 |
SKB81854.1 | SKB68203.1 | SAMN05660903_02702 | SAMN05660903_02030 | Outer membrane receptor proteins, mostly Fe transport. | Hypothetical protein. | 0.493 |
SKB81854.1 | SKB81831.1 | SAMN05660903_02702 | SAMN05660903_02700 | Outer membrane receptor proteins, mostly Fe transport. | Uncharacterized iron-regulated membrane protein. | 0.537 |
SKB81854.1 | SKB81844.1 | SAMN05660903_02702 | SAMN05660903_02701 | Outer membrane receptor proteins, mostly Fe transport. | Hypothetical protein. | 0.939 |
SKB81854.1 | SKB81863.1 | SAMN05660903_02702 | SAMN05660903_02703 | Outer membrane receptor proteins, mostly Fe transport. | AraC-type DNA-binding protein. | 0.558 |
SKB81863.1 | SKB81844.1 | SAMN05660903_02703 | SAMN05660903_02701 | AraC-type DNA-binding protein. | Hypothetical protein. | 0.505 |
SKB81863.1 | SKB81854.1 | SAMN05660903_02703 | SAMN05660903_02702 | AraC-type DNA-binding protein. | Outer membrane receptor proteins, mostly Fe transport. | 0.558 |