Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKB34827.1 | SKB43284.1 | SAMN05660903_00259 | SAMN05660903_00728 | PAS domain S-box-containing protein. | Hypothetical protein. | 0.999 |
SKB34827.1 | SKB94547.1 | SAMN05660903_00259 | SAMN05660903_03413 | PAS domain S-box-containing protein. | NUDIX domain-containing protein. | 0.758 |
SKB34827.1 | adk | SAMN05660903_00259 | SAMN05660903_01846 | PAS domain S-box-containing protein. | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | 0.677 |
SKB34827.1 | ribB | SAMN05660903_00259 | SAMN05660903_02595 | PAS domain S-box-containing protein. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.953 |
SKB43284.1 | SKB34827.1 | SAMN05660903_00728 | SAMN05660903_00259 | Hypothetical protein. | PAS domain S-box-containing protein. | 0.999 |
SKB43284.1 | SKB94547.1 | SAMN05660903_00728 | SAMN05660903_03413 | Hypothetical protein. | NUDIX domain-containing protein. | 0.760 |
SKB43284.1 | adk | SAMN05660903_00728 | SAMN05660903_01846 | Hypothetical protein. | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | 0.486 |
SKB43284.1 | ribB | SAMN05660903_00728 | SAMN05660903_02595 | Hypothetical protein. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.932 |
SKB44390.1 | SKB94547.1 | SAMN05660903_00852 | SAMN05660903_03413 | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | NUDIX domain-containing protein. | 0.772 |
SKB53501.1 | SKB61619.1 | SAMN05660903_01231 | SAMN05660903_01706 | ATP-dependent RNA helicase DeaD; Belongs to the DEAD box helicase family. | ATP-dependent RNA helicase RhlE. | 0.760 |
SKB53501.1 | SKB94547.1 | SAMN05660903_01231 | SAMN05660903_03413 | ATP-dependent RNA helicase DeaD; Belongs to the DEAD box helicase family. | NUDIX domain-containing protein. | 0.709 |
SKB53501.1 | nnrD | SAMN05660903_01231 | SAMN05660903_03225 | ATP-dependent RNA helicase DeaD; Belongs to the DEAD box helicase family. | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specif [...] | 0.900 |
SKB53501.1 | rnr | SAMN05660903_01231 | SAMN05660903_00353 | ATP-dependent RNA helicase DeaD; Belongs to the DEAD box helicase family. | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.500 |
SKB61619.1 | SKB53501.1 | SAMN05660903_01706 | SAMN05660903_01231 | ATP-dependent RNA helicase RhlE. | ATP-dependent RNA helicase DeaD; Belongs to the DEAD box helicase family. | 0.760 |
SKB61619.1 | SKB94547.1 | SAMN05660903_01706 | SAMN05660903_03413 | ATP-dependent RNA helicase RhlE. | NUDIX domain-containing protein. | 0.709 |
SKB61619.1 | nnrD | SAMN05660903_01706 | SAMN05660903_03225 | ATP-dependent RNA helicase RhlE. | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specif [...] | 0.900 |
SKB61619.1 | rnr | SAMN05660903_01706 | SAMN05660903_00353 | ATP-dependent RNA helicase RhlE. | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.500 |
SKB94547.1 | SKB34827.1 | SAMN05660903_03413 | SAMN05660903_00259 | NUDIX domain-containing protein. | PAS domain S-box-containing protein. | 0.758 |
SKB94547.1 | SKB43284.1 | SAMN05660903_03413 | SAMN05660903_00728 | NUDIX domain-containing protein. | Hypothetical protein. | 0.760 |
SKB94547.1 | SKB44390.1 | SAMN05660903_03413 | SAMN05660903_00852 | NUDIX domain-containing protein. | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | 0.772 |
page 1 of 3