Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHM03204.1 | SHM03240.1 | SAMN05660826_00012 | SAMN05660826_00013 | 4Fe-4S binding domain-containing protein. | Thiamine pyrophosphokinase. | 0.554 |
SHM03204.1 | SHM03269.1 | SAMN05660826_00012 | SAMN05660826_00014 | 4Fe-4S binding domain-containing protein. | PAS domain S-box-containing protein. | 0.454 |
SHM03240.1 | SHM03204.1 | SAMN05660826_00013 | SAMN05660826_00012 | Thiamine pyrophosphokinase. | 4Fe-4S binding domain-containing protein. | 0.554 |
SHM03240.1 | SHM03269.1 | SAMN05660826_00013 | SAMN05660826_00014 | Thiamine pyrophosphokinase. | PAS domain S-box-containing protein. | 0.620 |
SHM03240.1 | SHM03300.1 | SAMN05660826_00013 | SAMN05660826_00015 | Thiamine pyrophosphokinase. | Phosphate butyryltransferase. | 0.402 |
SHM03269.1 | SHM03204.1 | SAMN05660826_00014 | SAMN05660826_00012 | PAS domain S-box-containing protein. | 4Fe-4S binding domain-containing protein. | 0.454 |
SHM03269.1 | SHM03240.1 | SAMN05660826_00014 | SAMN05660826_00013 | PAS domain S-box-containing protein. | Thiamine pyrophosphokinase. | 0.620 |
SHM03269.1 | SHM03300.1 | SAMN05660826_00014 | SAMN05660826_00015 | PAS domain S-box-containing protein. | Phosphate butyryltransferase. | 0.482 |
SHM03269.1 | SHM03336.1 | SAMN05660826_00014 | SAMN05660826_00016 | PAS domain S-box-containing protein. | Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.401 |
SHM03269.1 | SHM28514.1 | SAMN05660826_00014 | SAMN05660826_00672 | PAS domain S-box-containing protein. | RNA polymerase, sigma 54 subunit, RpoN/SigL. | 0.769 |
SHM03269.1 | SHM36753.1 | SAMN05660826_00014 | SAMN05660826_00878 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.635 |
SHM03300.1 | SHM03240.1 | SAMN05660826_00015 | SAMN05660826_00013 | Phosphate butyryltransferase. | Thiamine pyrophosphokinase. | 0.402 |
SHM03300.1 | SHM03269.1 | SAMN05660826_00015 | SAMN05660826_00014 | Phosphate butyryltransferase. | PAS domain S-box-containing protein. | 0.482 |
SHM03300.1 | SHM03336.1 | SAMN05660826_00015 | SAMN05660826_00016 | Phosphate butyryltransferase. | Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.841 |
SHM03336.1 | SHM03269.1 | SAMN05660826_00016 | SAMN05660826_00014 | Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | PAS domain S-box-containing protein. | 0.401 |
SHM03336.1 | SHM03300.1 | SAMN05660826_00016 | SAMN05660826_00015 | Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Phosphate butyryltransferase. | 0.841 |
SHM28514.1 | SHM03269.1 | SAMN05660826_00672 | SAMN05660826_00014 | RNA polymerase, sigma 54 subunit, RpoN/SigL. | PAS domain S-box-containing protein. | 0.769 |
SHM28514.1 | SHM36753.1 | SAMN05660826_00672 | SAMN05660826_00878 | RNA polymerase, sigma 54 subunit, RpoN/SigL. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.607 |
SHM36753.1 | SHM03269.1 | SAMN05660826_00878 | SAMN05660826_00014 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein. | 0.635 |
SHM36753.1 | SHM28514.1 | SAMN05660826_00878 | SAMN05660826_00672 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | RNA polymerase, sigma 54 subunit, RpoN/SigL. | 0.607 |