STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bukButyrate kinase; Belongs to the acetokinase family. (356 aa)    
Predicted Functional Partners:
SHM03300.1
Phosphate butyryltransferase.
 
 0.998
SHM36344.1
Phosphate butyryltransferase.
 
 0.996
SHM03336.1
Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
  
 0.893
SHM09030.1
Phosphotransacetylase.
 
 
 0.839
SHM03395.1
2-oxoglutarate ferredoxin oxidoreductase subunit delta.
 
     0.731
SHM03483.1
2-oxoglutarate ferredoxin oxidoreductase subunit gamma.
     
 0.715
SHM36977.1
Glutaconate CoA-transferase subunit B.
     
 0.714
buk-2
Butyrate kinase; Belongs to the acetokinase family.
  
  
 
0.710
SHM03429.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
     
 0.708
SHM03463.1
2-oxoglutarate ferredoxin oxidoreductase subunit beta.
     
 0.702
Your Current Organism:
Caldanaerovirga acetigignens
NCBI taxonomy Id: 447595
Other names: C. acetigignens, Caldanaerovirga acetigignens Wagner et al. 2009, DSM 18802, strain JW/SA-NV4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.