Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHM15029.1 | SHM15058.1 | SAMN05660826_00312 | SAMN05660826_00313 | Predicted arabinose efflux permease, MFS family. | B3/B4 domain-containing protein (DNA/RNA-binding domain of Phe-tRNA-synthetase). | 0.520 |
SHM15029.1 | SHM26588.1 | SAMN05660826_00312 | SAMN05660826_00604 | Predicted arabinose efflux permease, MFS family. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.460 |
SHM15029.1 | SHM46645.1 | SAMN05660826_00312 | SAMN05660826_01117 | Predicted arabinose efflux permease, MFS family. | Formate dehydrogenase major subunit. | 0.423 |
SHM15029.1 | SHM76637.1 | SAMN05660826_00312 | SAMN05660826_01889 | Predicted arabinose efflux permease, MFS family. | Predicted arabinose efflux permease, MFS family. | 0.453 |
SHM15029.1 | SHM81200.1 | SAMN05660826_00312 | SAMN05660826_02014 | Predicted arabinose efflux permease, MFS family. | 5-methyltetrahydrofolate--homocysteine methyltransferase. | 0.639 |
SHM15058.1 | SHM15029.1 | SAMN05660826_00313 | SAMN05660826_00312 | B3/B4 domain-containing protein (DNA/RNA-binding domain of Phe-tRNA-synthetase). | Predicted arabinose efflux permease, MFS family. | 0.520 |
SHM26588.1 | SHM15029.1 | SAMN05660826_00604 | SAMN05660826_00312 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Predicted arabinose efflux permease, MFS family. | 0.460 |
SHM26588.1 | SHM46645.1 | SAMN05660826_00604 | SAMN05660826_01117 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Formate dehydrogenase major subunit. | 0.627 |
SHM26588.1 | SHM81200.1 | SAMN05660826_00604 | SAMN05660826_02014 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 5-methyltetrahydrofolate--homocysteine methyltransferase. | 0.498 |
SHM46645.1 | SHM15029.1 | SAMN05660826_01117 | SAMN05660826_00312 | Formate dehydrogenase major subunit. | Predicted arabinose efflux permease, MFS family. | 0.423 |
SHM46645.1 | SHM26588.1 | SAMN05660826_01117 | SAMN05660826_00604 | Formate dehydrogenase major subunit. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.627 |
SHM46645.1 | SHM81200.1 | SAMN05660826_01117 | SAMN05660826_02014 | Formate dehydrogenase major subunit. | 5-methyltetrahydrofolate--homocysteine methyltransferase. | 0.621 |
SHM76637.1 | SHM15029.1 | SAMN05660826_01889 | SAMN05660826_00312 | Predicted arabinose efflux permease, MFS family. | Predicted arabinose efflux permease, MFS family. | 0.453 |
SHM81200.1 | SHM15029.1 | SAMN05660826_02014 | SAMN05660826_00312 | 5-methyltetrahydrofolate--homocysteine methyltransferase. | Predicted arabinose efflux permease, MFS family. | 0.639 |
SHM81200.1 | SHM26588.1 | SAMN05660826_02014 | SAMN05660826_00604 | 5-methyltetrahydrofolate--homocysteine methyltransferase. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.498 |
SHM81200.1 | SHM46645.1 | SAMN05660826_02014 | SAMN05660826_01117 | 5-methyltetrahydrofolate--homocysteine methyltransferase. | Formate dehydrogenase major subunit. | 0.621 |