Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHM17904.1 | SHM17938.1 | SAMN05660826_00404 | SAMN05660826_00405 | Uncharacterised protein family (UPF0180). | Lipid kinase, YegS/Rv2252/BmrU family. | 0.653 |
SHM17904.1 | SHM17975.1 | SAMN05660826_00404 | SAMN05660826_00406 | Uncharacterised protein family (UPF0180). | Protein CcmA, bactofilin family. | 0.639 |
SHM17904.1 | SHM18004.1 | SAMN05660826_00404 | SAMN05660826_00407 | Uncharacterised protein family (UPF0180). | Peptidase family M23. | 0.618 |
SHM17904.1 | SHM18036.1 | SAMN05660826_00404 | SAMN05660826_00408 | Uncharacterised protein family (UPF0180). | Protein of unknown function. | 0.541 |
SHM17904.1 | SHM18066.1 | SAMN05660826_00404 | SAMN05660826_00409 | Uncharacterised protein family (UPF0180). | Hypothetical protein. | 0.469 |
SHM17904.1 | SHM18098.1 | SAMN05660826_00404 | SAMN05660826_00410 | Uncharacterised protein family (UPF0180). | Cysteine desulfurase family protein. | 0.415 |
SHM17938.1 | SHM17904.1 | SAMN05660826_00405 | SAMN05660826_00404 | Lipid kinase, YegS/Rv2252/BmrU family. | Uncharacterised protein family (UPF0180). | 0.653 |
SHM17938.1 | SHM17975.1 | SAMN05660826_00405 | SAMN05660826_00406 | Lipid kinase, YegS/Rv2252/BmrU family. | Protein CcmA, bactofilin family. | 0.783 |
SHM17938.1 | SHM18004.1 | SAMN05660826_00405 | SAMN05660826_00407 | Lipid kinase, YegS/Rv2252/BmrU family. | Peptidase family M23. | 0.746 |
SHM17938.1 | SHM18036.1 | SAMN05660826_00405 | SAMN05660826_00408 | Lipid kinase, YegS/Rv2252/BmrU family. | Protein of unknown function. | 0.657 |
SHM17938.1 | SHM18066.1 | SAMN05660826_00405 | SAMN05660826_00409 | Lipid kinase, YegS/Rv2252/BmrU family. | Hypothetical protein. | 0.590 |
SHM17938.1 | SHM18098.1 | SAMN05660826_00405 | SAMN05660826_00410 | Lipid kinase, YegS/Rv2252/BmrU family. | Cysteine desulfurase family protein. | 0.502 |
SHM17975.1 | SHM17904.1 | SAMN05660826_00406 | SAMN05660826_00404 | Protein CcmA, bactofilin family. | Uncharacterised protein family (UPF0180). | 0.639 |
SHM17975.1 | SHM17938.1 | SAMN05660826_00406 | SAMN05660826_00405 | Protein CcmA, bactofilin family. | Lipid kinase, YegS/Rv2252/BmrU family. | 0.783 |
SHM17975.1 | SHM18004.1 | SAMN05660826_00406 | SAMN05660826_00407 | Protein CcmA, bactofilin family. | Peptidase family M23. | 0.902 |
SHM17975.1 | SHM18036.1 | SAMN05660826_00406 | SAMN05660826_00408 | Protein CcmA, bactofilin family. | Protein of unknown function. | 0.688 |
SHM17975.1 | SHM18066.1 | SAMN05660826_00406 | SAMN05660826_00409 | Protein CcmA, bactofilin family. | Hypothetical protein. | 0.587 |
SHM17975.1 | SHM18098.1 | SAMN05660826_00406 | SAMN05660826_00410 | Protein CcmA, bactofilin family. | Cysteine desulfurase family protein. | 0.490 |
SHM18004.1 | SHM17904.1 | SAMN05660826_00407 | SAMN05660826_00404 | Peptidase family M23. | Uncharacterised protein family (UPF0180). | 0.618 |
SHM18004.1 | SHM17938.1 | SAMN05660826_00407 | SAMN05660826_00405 | Peptidase family M23. | Lipid kinase, YegS/Rv2252/BmrU family. | 0.746 |
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