STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM20207.1MobA-like NTP transferase domain-containing protein. (253 aa)    
Predicted Functional Partners:
SHM45547.1
Molybdopterin molybdochelatase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
  
 0.923
SHM20176.1
Transcriptional regulator, GntR family.
       0.859
ispE
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.
       0.846
SHM20233.1
Purine operon repressor, PurR.
       0.819
SHM68351.1
Hypothetical protein.
 
     0.784
SHM68321.1
Predicted amino acid dehydrogenase.
 
     0.775
SHM07375.1
Protein of unknown function.
  
     0.731
SHM45463.1
Molybdenum cofactor synthesis domain-containing protein.
  
 
 0.715
SHM68380.1
Helix-turn-helix.
  
     0.711
spoVG
Stage V sporulation protein G; Could be involved in septation.
       0.667
Your Current Organism:
Caldanaerovirga acetigignens
NCBI taxonomy Id: 447595
Other names: C. acetigignens, Caldanaerovirga acetigignens Wagner et al. 2009, DSM 18802, strain JW/SA-NV4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.