SHM29722.1 protein (Caldanaerovirga acetigignens)

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Known Interactions

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Predicted Interactions

gene neighborhood

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textmining

co-expression

protein homology

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[Homology]

Score

SHM29722.1

S-layer homology domain-containing protein. (726 aa)

Predicted Functional Partners:

SHM29335.1

0.747

SHM17047.1

0.743

SHM04536.1

0.741

SHM04318.1

0.732

SHM04597.1

0.730

SHM77753.1

0.680

SHM17077.1

0.671

SHM87576.1

0.646

SHM63773.1

0.565

SHM15700.1

0.528

Your Current Organism:

Caldanaerovirga acetigignens

NCBI taxonomy Id: 447595
Other names: C. acetigignens, Caldanaerovirga acetigignens Wagner et al. 2009, DSM 18802, strain JW/SA-NV4

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SHM04318.1	SHM17047.1	SAMN05660826_00047	SAMN05660826_00378	Hypothetical protein.	YycH protein.	0.525
SHM04318.1	SHM29335.1	SAMN05660826_00047	SAMN05660826_00700	Hypothetical protein.	Copper amine oxidase N-terminal domain-containing protein.	0.438
SHM04318.1	SHM29722.1	SAMN05660826_00047	SAMN05660826_00714	Hypothetical protein.	S-layer homology domain-containing protein.	0.732
SHM04318.1	SHM87576.1	SAMN05660826_00047	SAMN05660826_02220	Hypothetical protein.	Tetratricopeptide repeat-containing protein.	0.420
SHM04536.1	SHM04597.1	SAMN05660826_00055	SAMN05660826_00057	Protein of unknown function.	ABC-2 family transporter protein.	0.957
SHM04536.1	SHM17047.1	SAMN05660826_00055	SAMN05660826_00378	Protein of unknown function.	YycH protein.	0.505
SHM04536.1	SHM17077.1	SAMN05660826_00055	SAMN05660826_00379	Protein of unknown function.	Two-component signal transduction system YycFG, regulatory protein YycH.	0.440
SHM04536.1	SHM29335.1	SAMN05660826_00055	SAMN05660826_00700	Protein of unknown function.	Copper amine oxidase N-terminal domain-containing protein.	0.489
SHM04536.1	SHM29722.1	SAMN05660826_00055	SAMN05660826_00714	Protein of unknown function.	S-layer homology domain-containing protein.	0.741
SHM04536.1	SHM87576.1	SAMN05660826_00055	SAMN05660826_02220	Protein of unknown function.	Tetratricopeptide repeat-containing protein.	0.676
SHM04597.1	SHM04536.1	SAMN05660826_00057	SAMN05660826_00055	ABC-2 family transporter protein.	Protein of unknown function.	0.957
SHM04597.1	SHM17047.1	SAMN05660826_00057	SAMN05660826_00378	ABC-2 family transporter protein.	YycH protein.	0.468
SHM04597.1	SHM29335.1	SAMN05660826_00057	SAMN05660826_00700	ABC-2 family transporter protein.	Copper amine oxidase N-terminal domain-containing protein.	0.440
SHM04597.1	SHM29722.1	SAMN05660826_00057	SAMN05660826_00714	ABC-2 family transporter protein.	S-layer homology domain-containing protein.	0.730
SHM04597.1	SHM87576.1	SAMN05660826_00057	SAMN05660826_02220	ABC-2 family transporter protein.	Tetratricopeptide repeat-containing protein.	0.620
SHM15700.1	SHM17047.1	SAMN05660826_00335	SAMN05660826_00378	Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.	YycH protein.	0.633
SHM15700.1	SHM17077.1	SAMN05660826_00335	SAMN05660826_00379	Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.	Two-component signal transduction system YycFG, regulatory protein YycH.	0.649
SHM15700.1	SHM29335.1	SAMN05660826_00335	SAMN05660826_00700	Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.	Copper amine oxidase N-terminal domain-containing protein.	0.480
SHM15700.1	SHM29722.1	SAMN05660826_00335	SAMN05660826_00714	Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.	S-layer homology domain-containing protein.	0.528
SHM15700.1	SHM77753.1	SAMN05660826_00335	SAMN05660826_01929	Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.	S-layer homology domain-containing protein.	0.461