Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHM05111.1 | SHM30762.1 | SAMN05660826_00074 | SAMN05660826_00746 | Competence protein ComEC. | Type IV pilus assembly protein PilM. | 0.488 |
SHM05111.1 | SHM30885.1 | SAMN05660826_00074 | SAMN05660826_00750 | Competence protein ComEC. | Type 4 prepilin peptidase 1 Aspartic peptidase. MEROPS family A24A. | 0.792 |
SHM05111.1 | SHM30944.1 | SAMN05660826_00074 | SAMN05660826_00752 | Competence protein ComEC. | General secretion pathway protein G. | 0.592 |
SHM05111.1 | SHM30966.1 | SAMN05660826_00074 | SAMN05660826_00753 | Competence protein ComEC. | Type IV pilus assembly protein PilC. | 0.736 |
SHM05111.1 | SHM31006.1 | SAMN05660826_00074 | SAMN05660826_00755 | Competence protein ComEC. | Twitching motility protein PilT. | 0.518 |
SHM05111.1 | SHM31038.1 | SAMN05660826_00074 | SAMN05660826_00756 | Competence protein ComEC. | Type II secretion system protein E (GspE). | 0.635 |
SHM05111.1 | SHM51903.1 | SAMN05660826_00074 | SAMN05660826_01241 | Competence protein ComEC. | Type IV pilus assembly protein PilM. | 0.554 |
SHM05111.1 | SHM52037.1 | SAMN05660826_00074 | SAMN05660826_01246 | Competence protein ComEC. | General secretion pathway protein G. | 0.592 |
SHM05111.1 | SHM52062.1 | SAMN05660826_00074 | SAMN05660826_01247 | Competence protein ComEC. | Type IV pilus assembly protein PilC. | 0.736 |
SHM05111.1 | SHM52094.1 | SAMN05660826_00074 | SAMN05660826_01248 | Competence protein ComEC. | Type IV pilus assembly protein PilB. | 0.635 |
SHM30762.1 | SHM05111.1 | SAMN05660826_00746 | SAMN05660826_00074 | Type IV pilus assembly protein PilM. | Competence protein ComEC. | 0.488 |
SHM30762.1 | SHM30885.1 | SAMN05660826_00746 | SAMN05660826_00750 | Type IV pilus assembly protein PilM. | Type 4 prepilin peptidase 1 Aspartic peptidase. MEROPS family A24A. | 0.922 |
SHM30762.1 | SHM30944.1 | SAMN05660826_00746 | SAMN05660826_00752 | Type IV pilus assembly protein PilM. | General secretion pathway protein G. | 0.667 |
SHM30762.1 | SHM30966.1 | SAMN05660826_00746 | SAMN05660826_00753 | Type IV pilus assembly protein PilM. | Type IV pilus assembly protein PilC. | 0.914 |
SHM30762.1 | SHM31006.1 | SAMN05660826_00746 | SAMN05660826_00755 | Type IV pilus assembly protein PilM. | Twitching motility protein PilT. | 0.825 |
SHM30762.1 | SHM31038.1 | SAMN05660826_00746 | SAMN05660826_00756 | Type IV pilus assembly protein PilM. | Type II secretion system protein E (GspE). | 0.889 |
SHM30762.1 | SHM52062.1 | SAMN05660826_00746 | SAMN05660826_01247 | Type IV pilus assembly protein PilM. | Type IV pilus assembly protein PilC. | 0.882 |
SHM30762.1 | SHM52094.1 | SAMN05660826_00746 | SAMN05660826_01248 | Type IV pilus assembly protein PilM. | Type IV pilus assembly protein PilB. | 0.854 |
SHM30885.1 | SHM05111.1 | SAMN05660826_00750 | SAMN05660826_00074 | Type 4 prepilin peptidase 1 Aspartic peptidase. MEROPS family A24A. | Competence protein ComEC. | 0.792 |
SHM30885.1 | SHM30762.1 | SAMN05660826_00750 | SAMN05660826_00746 | Type 4 prepilin peptidase 1 Aspartic peptidase. MEROPS family A24A. | Type IV pilus assembly protein PilM. | 0.922 |
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