Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHM35530.1 | SHM35563.1 | SAMN05660826_00832 | SAMN05660826_00833 | Membrane dipeptidase. | DNA adenine methylase. | 0.520 |
SHM35530.1 | SHM35590.1 | SAMN05660826_00832 | SAMN05660826_00834 | Membrane dipeptidase. | Type II restriction enzyme; Recognizes the double-stranded unmethylated sequence GATC and cleaves before G-1; Belongs to the type II restriction enzyme DpnII family. | 0.506 |
SHM35530.1 | SHM35618.1 | SAMN05660826_00832 | SAMN05660826_00835 | Membrane dipeptidase. | DNA methylase; Belongs to the N(4)/N(6)-methyltransferase family. | 0.506 |
SHM35530.1 | nfo | SAMN05660826_00832 | SAMN05660826_00831 | Membrane dipeptidase. | Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | 0.773 |
SHM35530.1 | nth | SAMN05660826_00832 | SAMN05660826_00830 | Membrane dipeptidase. | DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.732 |
SHM35563.1 | SHM35530.1 | SAMN05660826_00833 | SAMN05660826_00832 | DNA adenine methylase. | Membrane dipeptidase. | 0.520 |
SHM35563.1 | SHM35590.1 | SAMN05660826_00833 | SAMN05660826_00834 | DNA adenine methylase. | Type II restriction enzyme; Recognizes the double-stranded unmethylated sequence GATC and cleaves before G-1; Belongs to the type II restriction enzyme DpnII family. | 0.992 |
SHM35563.1 | SHM35618.1 | SAMN05660826_00833 | SAMN05660826_00835 | DNA adenine methylase. | DNA methylase; Belongs to the N(4)/N(6)-methyltransferase family. | 0.955 |
SHM35563.1 | SHM67835.1 | SAMN05660826_00833 | SAMN05660826_01665 | DNA adenine methylase. | Site-specific DNA-methyltransferase (adenine-specific); Belongs to the N(4)/N(6)-methyltransferase family. | 0.520 |
SHM35563.1 | nfo | SAMN05660826_00833 | SAMN05660826_00831 | DNA adenine methylase. | Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | 0.520 |
SHM35563.1 | nth | SAMN05660826_00833 | SAMN05660826_00830 | DNA adenine methylase. | DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.494 |
SHM35590.1 | SHM35530.1 | SAMN05660826_00834 | SAMN05660826_00832 | Type II restriction enzyme; Recognizes the double-stranded unmethylated sequence GATC and cleaves before G-1; Belongs to the type II restriction enzyme DpnII family. | Membrane dipeptidase. | 0.506 |
SHM35590.1 | SHM35563.1 | SAMN05660826_00834 | SAMN05660826_00833 | Type II restriction enzyme; Recognizes the double-stranded unmethylated sequence GATC and cleaves before G-1; Belongs to the type II restriction enzyme DpnII family. | DNA adenine methylase. | 0.992 |
SHM35590.1 | SHM35618.1 | SAMN05660826_00834 | SAMN05660826_00835 | Type II restriction enzyme; Recognizes the double-stranded unmethylated sequence GATC and cleaves before G-1; Belongs to the type II restriction enzyme DpnII family. | DNA methylase; Belongs to the N(4)/N(6)-methyltransferase family. | 0.960 |
SHM35590.1 | SHM67835.1 | SAMN05660826_00834 | SAMN05660826_01665 | Type II restriction enzyme; Recognizes the double-stranded unmethylated sequence GATC and cleaves before G-1; Belongs to the type II restriction enzyme DpnII family. | Site-specific DNA-methyltransferase (adenine-specific); Belongs to the N(4)/N(6)-methyltransferase family. | 0.500 |
SHM35590.1 | nfo | SAMN05660826_00834 | SAMN05660826_00831 | Type II restriction enzyme; Recognizes the double-stranded unmethylated sequence GATC and cleaves before G-1; Belongs to the type II restriction enzyme DpnII family. | Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | 0.506 |
SHM35590.1 | nth | SAMN05660826_00834 | SAMN05660826_00830 | Type II restriction enzyme; Recognizes the double-stranded unmethylated sequence GATC and cleaves before G-1; Belongs to the type II restriction enzyme DpnII family. | DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.482 |
SHM35618.1 | SHM35530.1 | SAMN05660826_00835 | SAMN05660826_00832 | DNA methylase; Belongs to the N(4)/N(6)-methyltransferase family. | Membrane dipeptidase. | 0.506 |
SHM35618.1 | SHM35563.1 | SAMN05660826_00835 | SAMN05660826_00833 | DNA methylase; Belongs to the N(4)/N(6)-methyltransferase family. | DNA adenine methylase. | 0.955 |
SHM35618.1 | SHM35590.1 | SAMN05660826_00835 | SAMN05660826_00834 | DNA methylase; Belongs to the N(4)/N(6)-methyltransferase family. | Type II restriction enzyme; Recognizes the double-stranded unmethylated sequence GATC and cleaves before G-1; Belongs to the type II restriction enzyme DpnII family. | 0.960 |
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