STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM38961.1Fructose-1-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. (313 aa)    
Predicted Functional Partners:
SHM39031.1
PTS system D-fructose-specific IIB component (F1P-forming), Frc family (TC 4.A.2.1.1)/PTS system D-fructose-specific IIC component (F1P-forming), Frc family (TC 4.A.2.1.1).
 
 0.999
SHM38996.1
PTS system D-fructose-specific IIA component (F1P-forming), Frc family.
 
 
 0.989
SHM09271.1
3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.982
SHM38924.1
Transcriptional regulator, DeoR family.
 
  
 0.981
SHM88838.1
Lichenan operon transcriptional antiterminator.
  
 
 0.956
SHM20521.1
PTS system D-mannitol-specific IIA component, Fru family (TC 4.A.2.1.2).
 
 
 0.940
SHM27374.1
Fructose-bisphosphate aldolase.
  
 
 0.934
SHM25511.1
Ribose 5-phosphate isomerase B.
  
 
 0.921
SHM68008.1
Ribose 5-phosphate isomerase B.
  
 
 0.921
SHM91291.1
Transcriptional regulator, DeoR family.
 
  
 0.903
Your Current Organism:
Caldanaerovirga acetigignens
NCBI taxonomy Id: 447595
Other names: C. acetigignens, Caldanaerovirga acetigignens Wagner et al. 2009, DSM 18802, strain JW/SA-NV4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.