STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM57251.1D-proline reductase (dithiol) PrdE. (154 aa)    
Predicted Functional Partners:
SHM57280.1
D-proline reductase (dithiol) PrdA.
   
 0.995
SHM57341.1
D-proline reductase (dithiol) PrdB.
   
 0.969
SHM57196.1
Sulfite exporter TauE/SafE.
 
     0.946
SHM57226.1
Proline racemase; Belongs to the proline racemase family.
 
   
 0.933
SHM57312.1
D-proline reductase (dithiol) PrdB.
 
     0.919
SHM57430.1
Proline reductase-associated electron transfer protein PrdC.
 
   
 0.869
SHM57397.1
D-proline reductase (dithiol) PrdA.
 
    
0.562
SHM57138.1
ATP-binding cassette, subfamily B.
  
    0.459
SHM57168.1
ATP-binding cassette, subfamily B.
  
    0.459
SHM35972.1
Voltage-dependent anion channel.
 
     0.451
Your Current Organism:
Caldanaerovirga acetigignens
NCBI taxonomy Id: 447595
Other names: C. acetigignens, Caldanaerovirga acetigignens Wagner et al. 2009, DSM 18802, strain JW/SA-NV4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.