Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHM41983.1 | SHM64568.1 | SAMN05660826_00965 | SAMN05660826_01578 | Protein of unknown function. | Hypothetical protein. | 0.476 |
SHM41983.1 | SHM75182.1 | SAMN05660826_00965 | SAMN05660826_01862 | Protein of unknown function. | Putative regulatory protein, FmdB family. | 0.467 |
SHM43184.1 | SHM64568.1 | SAMN05660826_01003 | SAMN05660826_01578 | Rubrerythrin. | Hypothetical protein. | 0.430 |
SHM64568.1 | SHM41983.1 | SAMN05660826_01578 | SAMN05660826_00965 | Hypothetical protein. | Protein of unknown function. | 0.476 |
SHM64568.1 | SHM43184.1 | SAMN05660826_01578 | SAMN05660826_01003 | Hypothetical protein. | Rubrerythrin. | 0.430 |
SHM64568.1 | SHM64587.1 | SAMN05660826_01578 | SAMN05660826_01579 | Hypothetical protein. | Aspartate kinase; Belongs to the aspartokinase family. | 0.636 |
SHM64568.1 | SHM75182.1 | SAMN05660826_01578 | SAMN05660826_01862 | Hypothetical protein. | Putative regulatory protein, FmdB family. | 0.449 |
SHM64568.1 | asd | SAMN05660826_01578 | SAMN05660826_01580 | Hypothetical protein. | Aspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.583 |
SHM64587.1 | SHM64568.1 | SAMN05660826_01579 | SAMN05660826_01578 | Aspartate kinase; Belongs to the aspartokinase family. | Hypothetical protein. | 0.636 |
SHM64587.1 | asd | SAMN05660826_01579 | SAMN05660826_01580 | Aspartate kinase; Belongs to the aspartokinase family. | Aspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.999 |
SHM75182.1 | SHM41983.1 | SAMN05660826_01862 | SAMN05660826_00965 | Putative regulatory protein, FmdB family. | Protein of unknown function. | 0.467 |
SHM75182.1 | SHM64568.1 | SAMN05660826_01862 | SAMN05660826_01578 | Putative regulatory protein, FmdB family. | Hypothetical protein. | 0.449 |
asd | SHM64568.1 | SAMN05660826_01580 | SAMN05660826_01578 | Aspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | Hypothetical protein. | 0.583 |
asd | SHM64587.1 | SAMN05660826_01580 | SAMN05660826_01579 | Aspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | Aspartate kinase; Belongs to the aspartokinase family. | 0.999 |