STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM70743.1Formate C-acetyltransferase. (743 aa)    
Predicted Functional Partners:
SHM70706.1
Pyruvate formate lyase activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family.
  
 0.996
SHM81179.1
Pyruvate formate lyase activating enzyme.
  
 0.936
SHM09030.1
Phosphotransacetylase.
   
 
 0.926
SHM46645.1
Formate dehydrogenase major subunit.
     
 0.911
SHM04381.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 
 0.891
SHM27986.1
enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase.
     
 0.855
SHM71551.1
Pyruvate ferredoxin oxidoreductase delta subunit.
    
 0.853
SHM88332.1
Propionaldehyde dehydrogenase.
 
 
 0.848
SHM06108.1
Pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family.
     
 0.840
leuD
3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily.
     
 0.808
Your Current Organism:
Caldanaerovirga acetigignens
NCBI taxonomy Id: 447595
Other names: C. acetigignens, Caldanaerovirga acetigignens Wagner et al. 2009, DSM 18802, strain JW/SA-NV4
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