STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM71551.1Pyruvate ferredoxin oxidoreductase delta subunit. (125 aa)    
Predicted Functional Partners:
SHM71479.1
Pyruvate ferredoxin oxidoreductase beta subunit.
 
 0.997
SHM71516.1
Pyruvate ferredoxin oxidoreductase, alpha subunit.
 
 0.995
SHM71574.1
Pyruvate ferredoxin oxidoreductase, gamma subunit.
 
 
 0.994
SHM80292.1
Pyruvate ferredoxin oxidoreductase beta subunit.
 
 0.982
SHM80316.1
Pyruvate ferredoxin oxidoreductase, alpha subunit.
 
 0.982
SHM03463.1
2-oxoglutarate ferredoxin oxidoreductase subunit beta.
  
 0.959
SHM03429.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 0.957
SHM80364.1
Pyruvate ferredoxin oxidoreductase gamma subunit.
 
 
 0.953
SHM09030.1
Phosphotransacetylase.
     
 0.934
SHM48916.1
2-oxoglutarate ferredoxin oxidoreductase subunit beta.
  
 0.920
Your Current Organism:
Caldanaerovirga acetigignens
NCBI taxonomy Id: 447595
Other names: C. acetigignens, Caldanaerovirga acetigignens Wagner et al. 2009, DSM 18802, strain JW/SA-NV4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.