Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHM05919.1 | SHM20855.1 | SAMN05660826_00101 | SAMN05660826_00504 | Diacylglycerol kinase (ATP). | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 0.852 |
SHM05919.1 | SHM50250.1 | SAMN05660826_00101 | SAMN05660826_01184 | Diacylglycerol kinase (ATP). | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | 0.887 |
SHM05919.1 | SHM74719.1 | SAMN05660826_00101 | SAMN05660826_01841 | Diacylglycerol kinase (ATP). | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 0.874 |
SHM05919.1 | gpsA | SAMN05660826_00101 | SAMN05660826_00155 | Diacylglycerol kinase (ATP). | Glycerol 3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.852 |
SHM20855.1 | SHM05919.1 | SAMN05660826_00504 | SAMN05660826_00101 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | Diacylglycerol kinase (ATP). | 0.852 |
SHM20855.1 | SHM50250.1 | SAMN05660826_00504 | SAMN05660826_01184 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | 0.883 |
SHM20855.1 | SHM74719.1 | SAMN05660826_00504 | SAMN05660826_01841 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 0.873 |
SHM20855.1 | cmk | SAMN05660826_00504 | SAMN05660826_01840 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | Cytidylate kinase. | 0.776 |
SHM20855.1 | gpsA | SAMN05660826_00504 | SAMN05660826_00155 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | Glycerol 3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.854 |
SHM20855.1 | ispH | SAMN05660826_00504 | SAMN05660826_01842 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.421 |
SHM20855.1 | plsY | SAMN05660826_00504 | SAMN05660826_01606 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | Glycerol-3-phosphate acyltransferase PlsY; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. | 0.873 |
SHM50250.1 | SHM05919.1 | SAMN05660826_01184 | SAMN05660826_00101 | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | Diacylglycerol kinase (ATP). | 0.887 |
SHM50250.1 | SHM20855.1 | SAMN05660826_01184 | SAMN05660826_00504 | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 0.883 |
SHM50250.1 | SHM74719.1 | SAMN05660826_01184 | SAMN05660826_01841 | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 0.885 |
SHM50250.1 | cmk | SAMN05660826_01184 | SAMN05660826_01840 | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | Cytidylate kinase. | 0.410 |
SHM50250.1 | gpsA | SAMN05660826_01184 | SAMN05660826_00155 | Phosphatidate cytidylyltransferase; Belongs to the CDS family. | Glycerol 3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.486 |
SHM74626.1 | SHM74651.1 | SAMN05660826_01837 | SAMN05660826_01838 | Iron complex transport system ATP-binding protein. | Hypothetical protein. | 0.723 |
SHM74626.1 | SHM74674.1 | SAMN05660826_01837 | SAMN05660826_01839 | Iron complex transport system ATP-binding protein. | Hypothetical protein. | 0.664 |
SHM74626.1 | SHM74719.1 | SAMN05660826_01837 | SAMN05660826_01841 | Iron complex transport system ATP-binding protein. | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 0.647 |
SHM74626.1 | cmk | SAMN05660826_01837 | SAMN05660826_01840 | Iron complex transport system ATP-binding protein. | Cytidylate kinase. | 0.646 |
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