STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM83196.1CO dehydrogenase maturation factor. (265 aa)    
Predicted Functional Partners:
SHM83130.1
CO-methylating acetyl-CoA synthase precursor.
 
  
 0.983
SHM83181.1
acetyl-CoA decarbonylase/synthase delta subunit.
 
  
 0.975
SHM83165.1
CO-methylating acetyl-CoA synthase corrinoid iron-sulfur protein large subunit precursor.
 
  
 0.973
SHM83091.1
Uncharacterized 2Fe-2 and 4Fe-4S clusters-containing protein, contains DUF4445 domain.
 
   
 0.863
SHM83148.1
Methyltetrahydrofolate--corrinoid iron-sulfur protein Co-methyltransferase.
 
   
 0.854
SHM33917.1
Ni-dependent carbon monoxide dehydrogenase precursor.
 
   
 0.833
SHM83206.1
Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain.
     
 0.766
SHM25782.1
Predicted RNA-binding protein.
 
    0.751
gcvH-2
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
     
 0.600
SHM21238.1
Uncharacterized 2Fe-2 and 4Fe-4S clusters-containing protein, contains DUF4445 domain.
 
   
 0.589
Your Current Organism:
Caldanaerovirga acetigignens
NCBI taxonomy Id: 447595
Other names: C. acetigignens, Caldanaerovirga acetigignens Wagner et al. 2009, DSM 18802, strain JW/SA-NV4
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