Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHM42336.1 | SHM89415.1 | SAMN05660826_00977 | SAMN05660826_02273 | D-alanine--D-alanine ligase. | D-aminopeptidase. | 0.816 |
SHM64104.1 | SHM89415.1 | SAMN05660826_01555 | SAMN05660826_02273 | Oligopeptide transport system permease protein. | D-aminopeptidase. | 0.612 |
SHM89415.1 | SHM42336.1 | SAMN05660826_02273 | SAMN05660826_00977 | D-aminopeptidase. | D-alanine--D-alanine ligase. | 0.816 |
SHM89415.1 | SHM64104.1 | SAMN05660826_02273 | SAMN05660826_01555 | D-aminopeptidase. | Oligopeptide transport system permease protein. | 0.612 |
SHM89415.1 | SHM89437.1 | SAMN05660826_02273 | SAMN05660826_02274 | D-aminopeptidase. | HEPN domain-containing protein. | 0.538 |
SHM89415.1 | SHM89453.1 | SAMN05660826_02273 | SAMN05660826_02275 | D-aminopeptidase. | Predicted nucleotidyltransferase. | 0.538 |
SHM89415.1 | SHM89477.1 | SAMN05660826_02273 | SAMN05660826_02276 | D-aminopeptidase. | Hypothetical protein. | 0.497 |
SHM89415.1 | SHM89501.1 | SAMN05660826_02273 | SAMN05660826_02277 | D-aminopeptidase. | Protein of unknown function. | 0.497 |
SHM89415.1 | SHM89526.1 | SAMN05660826_02273 | SAMN05660826_02278 | D-aminopeptidase. | Uncharacterized protein YPO0396. | 0.497 |
SHM89415.1 | SHM89547.1 | SAMN05660826_02273 | SAMN05660826_02279 | D-aminopeptidase. | Hypothetical protein. | 0.497 |
SHM89415.1 | birA | SAMN05660826_02273 | SAMN05660826_00068 | D-aminopeptidase. | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.412 |
SHM89415.1 | dapB-2 | SAMN05660826_02273 | SAMN05660826_02280 | D-aminopeptidase. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.434 |
SHM89437.1 | SHM89415.1 | SAMN05660826_02274 | SAMN05660826_02273 | HEPN domain-containing protein. | D-aminopeptidase. | 0.538 |
SHM89437.1 | SHM89453.1 | SAMN05660826_02274 | SAMN05660826_02275 | HEPN domain-containing protein. | Predicted nucleotidyltransferase. | 0.788 |
SHM89437.1 | SHM89477.1 | SAMN05660826_02274 | SAMN05660826_02276 | HEPN domain-containing protein. | Hypothetical protein. | 0.709 |
SHM89437.1 | SHM89501.1 | SAMN05660826_02274 | SAMN05660826_02277 | HEPN domain-containing protein. | Protein of unknown function. | 0.709 |
SHM89437.1 | SHM89526.1 | SAMN05660826_02274 | SAMN05660826_02278 | HEPN domain-containing protein. | Uncharacterized protein YPO0396. | 0.709 |
SHM89437.1 | SHM89547.1 | SAMN05660826_02274 | SAMN05660826_02279 | HEPN domain-containing protein. | Hypothetical protein. | 0.709 |
SHM89437.1 | dapB-2 | SAMN05660826_02274 | SAMN05660826_02280 | HEPN domain-containing protein. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.608 |
SHM89453.1 | SHM89415.1 | SAMN05660826_02275 | SAMN05660826_02273 | Predicted nucleotidyltransferase. | D-aminopeptidase. | 0.538 |
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