STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCK42754.1Sterol desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)    
Predicted Functional Partners:
OCK43934.1
Phytoene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.666
OCK42755.1
Fe-S-oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.665
OCK42049.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.602
OCK42601.1
Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.519
kmo
Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid; Belongs to the aromatic-ring hydroxylase family. KMO subfamily.
   
  0.519
OCK42026.1
SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.502
OCK43315.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.456
argS
arginine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.444
OCK43317.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.435
OCK43664.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.412
Your Current Organism:
Tenacibaculum soleae
NCBI taxonomy Id: 447689
Other names: CECT 7292, NCIMB 14368, T. soleae, Tenacibaculum soleae Pineiro-Vidal et al. 2008, strain LL04 12.1.7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.