STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCK42598.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (145 aa)    
Predicted Functional Partners:
OCK42599.1
tRNA 2-methylthio-N6-isopentenyl adenosine(37) hydroxylase MiaE; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.785
OCK42059.1
Sugar isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.615
OCK43342.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.614
OCK42403.1
Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.522
OCK42600.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.508
OCK42989.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.493
OCK43635.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.492
OCK43515.1
Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.458
OCK43628.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.452
OCK43099.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.431
Your Current Organism:
Tenacibaculum soleae
NCBI taxonomy Id: 447689
Other names: CECT 7292, NCIMB 14368, T. soleae, Tenacibaculum soleae Pineiro-Vidal et al. 2008, strain LL04 12.1.7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.