Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
Lery_0036acyl-CoA thioesterase YbgC. (109 aa)    
Predicted Functional Partners:
Lery_1668
Polyketide synthase module.
  
 0.986
Lery_0035
Major facilitator family transporter.
       0.762
fadB
3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.761
yfcX
Enoyl CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.761
acpP_1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.521
fabD
Malonyl CoA-ACP transacylase.
   
 
 0.515
Lery_0047
Enoyl CoA hydratase/isomerase (crotonase).
   
 
  0.468
Lery_2680
3-hydroxyisobutyryl-CoA hydrolase.
   
 
  0.468
Lery_2681
Enoyl-CoA hydratase/carnithine racemase.
   
 
  0.468
Lery_1559
Pyoverdine biosynthesis protein PvcB.
     
  0.462
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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