Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lery_0056Thioredoxin reductase. (300 aa)    
Predicted Functional Partners:
Lery_2759
Putative thioredoxin 1; Belongs to the thioredoxin family.
 
 0.887
trxB
Thioredoxin reductase.
  
  
 
0.853
sufS
Selenocysteine lyase, PLP-dependent; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
   
 
  0.805
trxA
Thioredoxin.
 
 0.789
trxA3
Thioredoxin; Belongs to the thioredoxin family.
 
 0.787
ahpC
Alkyl hydroperoxide reductase.
  
 
 0.728
Lery_0463
Alkylhydroperoxide reductase, AhpC/TSA family.
  
 
 0.705
fadH
2,4-dienoyl-CoA reductase FadH1.
  
 
 0.693
Lery_2432
Oxidoreductase, FAD-binding protein.
   
 0.682
Lery_1284
Abi-like protein.
   
 0.604
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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