Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
yueDSepiapterin reductase. (252 aa)    
Predicted Functional Partners:
Lery_1668
Polyketide synthase module.
  
 0.960
yjeA
Endo-1,4-beta-xylanase.
   
  0.883
hutI
Imidazolonepropionase.
       0.866
Lery_0080
Oligopeptide transporter.
       0.866
hutG
Formiminoglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family.
       0.736
Lery_2340
Oxidoreductase dehydrogenase, short chain; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.728
Lery_1437
enoyl-ACP reductase.
  
     0.723
Lery_0075
IcmL-like protein.
       0.722
Lery_2520
Acetyoacetyl CoA reductase.
  
     0.719
phaB_4
Acetoacetyl CoA reductase.
  
     0.715
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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