Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lery_1097 | Lery_1611 | Lery_1097 | Lery_1611 | Photosystem I assembly protein Ycf3. | Metallo-beta-lactamase. | 0.494 |
Lery_1097 | Lery_1901 | Lery_1097 | Lery_1901 | Photosystem I assembly protein Ycf3. | Beta-lactamase superfamily domain protein. | 0.494 |
Lery_1097 | Lery_2007 | Lery_1097 | Lery_2007 | Photosystem I assembly protein Ycf3. | SNF2/RAD54 family transporter domain-containing protein. | 0.780 |
Lery_1097 | Lery_2410 | Lery_1097 | Lery_2410 | Photosystem I assembly protein Ycf3. | Metallo-beta lactamase family transporter protein. | 0.494 |
Lery_1097 | alaS | Lery_1097 | Lery_0137 | Photosystem I assembly protein Ycf3. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.960 |
Lery_1097 | apaH | Lery_1097 | Lery_2747 | Photosystem I assembly protein Ycf3. | Bis(5'-nucleosyl)-tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family. | 0.566 |
Lery_1097 | bcp | Lery_1097 | Lery_0954 | Photosystem I assembly protein Ycf3. | Acetylpolyamine aminohydrolase. | 0.847 |
Lery_1097 | yjeA | Lery_1097 | Lery_0079 | Photosystem I assembly protein Ycf3. | Endo-1,4-beta-xylanase. | 0.969 |
Lery_1581 | Lery_1611 | Lery_1581 | Lery_1611 | Methyltransferase. | Metallo-beta-lactamase. | 0.565 |
Lery_1581 | Lery_1901 | Lery_1581 | Lery_1901 | Methyltransferase. | Beta-lactamase superfamily domain protein. | 0.565 |
Lery_1581 | Lery_2007 | Lery_1581 | Lery_2007 | Methyltransferase. | SNF2/RAD54 family transporter domain-containing protein. | 0.736 |
Lery_1581 | Lery_2410 | Lery_1581 | Lery_2410 | Methyltransferase. | Metallo-beta lactamase family transporter protein. | 0.565 |
Lery_1581 | alaS | Lery_1581 | Lery_0137 | Methyltransferase. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.962 |
Lery_1581 | apaH | Lery_1581 | Lery_2747 | Methyltransferase. | Bis(5'-nucleosyl)-tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family. | 0.566 |
Lery_1581 | bcp | Lery_1581 | Lery_0954 | Methyltransferase. | Acetylpolyamine aminohydrolase. | 0.523 |
Lery_1581 | yjeA | Lery_1581 | Lery_0079 | Methyltransferase. | Endo-1,4-beta-xylanase. | 0.969 |
Lery_1611 | Lery_1097 | Lery_1611 | Lery_1097 | Metallo-beta-lactamase. | Photosystem I assembly protein Ycf3. | 0.494 |
Lery_1611 | Lery_1581 | Lery_1611 | Lery_1581 | Metallo-beta-lactamase. | Methyltransferase. | 0.565 |
Lery_1611 | Lery_2007 | Lery_1611 | Lery_2007 | Metallo-beta-lactamase. | SNF2/RAD54 family transporter domain-containing protein. | 0.414 |
Lery_1611 | apaH | Lery_1611 | Lery_2747 | Metallo-beta-lactamase. | Bis(5'-nucleosyl)-tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family. | 0.878 |
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