Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
Lery_0112DNA-binding protein; Belongs to the Dps family. (144 aa)    
Predicted Functional Partners:
clpS
Regulatory protein for ClpA substrate specificity; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
   
 
 0.919
Lery_0792
Serine transporter.
    
   0.832
Lery_0660
Serine protein kinase.
   
    0.779
Lery_1922
OsmC-like protein.
  
  
 0.767
wrbA_1
Flavoprotein WrbA (Trp repressor binding protein); Belongs to the WrbA family.
   
  
 0.706
wrbA_2
Flavoprotein WrbA (Trp repressor binding protein).
   
  
 0.706
yhbH
Ribosome-associated, sigma 54 modulation protein.
   
    0.686
Lery_0370
Transcriptional regulator BolA; Belongs to the BolA/IbaG family.
   
  
 0.672
Lery_0111
Hypothetical protein.
       0.659
Lery_0684
Cation transporting ATPase PacS.
  
  
 0.654
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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