Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lery_0075 | Lery_0139 | Lery_0075 | Lery_0139 | IcmL-like protein. | Hypothetical protein. | 0.543 |
Lery_0075 | Lery_0181 | Lery_0075 | Lery_0181 | IcmL-like protein. | Fe-S protein. | 0.649 |
Lery_0075 | Lery_0779 | Lery_0075 | Lery_0779 | IcmL-like protein. | Hypothetical protein. | 0.760 |
Lery_0075 | Lery_1409 | Lery_0075 | Lery_1409 | IcmL-like protein. | Hypothetical protein. | 0.747 |
Lery_0075 | Lery_1556 | Lery_0075 | Lery_1556 | IcmL-like protein. | Hypothetical protein. | 0.648 |
Lery_0075 | Lery_2247 | Lery_0075 | Lery_2247 | IcmL-like protein. | Outer membrane efflux protein. | 0.750 |
Lery_0075 | Lery_2303 | Lery_0075 | Lery_2303 | IcmL-like protein. | LphB. | 0.715 |
Lery_0075 | Lery_2477 | Lery_0075 | Lery_2477 | IcmL-like protein. | Acid sphingomyelinase-like phosphodiesterase. | 0.750 |
Lery_0075 | Lery_2717 | Lery_0075 | Lery_2717 | IcmL-like protein. | Coiled-coil protein. | 0.788 |
Lery_0075 | iraA | Lery_0075 | Lery_1993 | IcmL-like protein. | Small-molecule methyltransferase IraA. | 0.731 |
Lery_0139 | Lery_0075 | Lery_0139 | Lery_0075 | Hypothetical protein. | IcmL-like protein. | 0.543 |
Lery_0139 | Lery_0181 | Lery_0139 | Lery_0181 | Hypothetical protein. | Fe-S protein. | 0.613 |
Lery_0139 | Lery_0779 | Lery_0139 | Lery_0779 | Hypothetical protein. | Hypothetical protein. | 0.719 |
Lery_0139 | Lery_1409 | Lery_0139 | Lery_1409 | Hypothetical protein. | Hypothetical protein. | 0.644 |
Lery_0139 | Lery_1556 | Lery_0139 | Lery_1556 | Hypothetical protein. | Hypothetical protein. | 0.573 |
Lery_0139 | Lery_2247 | Lery_0139 | Lery_2247 | Hypothetical protein. | Outer membrane efflux protein. | 0.538 |
Lery_0139 | Lery_2303 | Lery_0139 | Lery_2303 | Hypothetical protein. | LphB. | 0.554 |
Lery_0139 | Lery_2477 | Lery_0139 | Lery_2477 | Hypothetical protein. | Acid sphingomyelinase-like phosphodiesterase. | 0.711 |
Lery_0139 | Lery_2717 | Lery_0139 | Lery_2717 | Hypothetical protein. | Coiled-coil protein. | 0.666 |
Lery_0139 | iraA | Lery_0139 | Lery_1993 | Hypothetical protein. | Small-molecule methyltransferase IraA. | 0.695 |
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