STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lery_0141Oxidoreductase. (333 aa)    
Predicted Functional Partners:
Lery_1668
Polyketide synthase module.
  
 0.940
iolCB
IolC/IolB transferase kinase protein.
 
 
 0.940
iolE
Myo-inositol catabolism protein iolE.
 
 
 0.876
ugd
UDP-glucose 6-dehydrogenase.
  
 
 0.742
Lery_1795
Polysaccharide biosynthesis protein; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.709
yvfE
Cell wall biosynthesis regulatory pyridoxal phosphate-dependent protein.
  
 
 0.709
Lery_1681
2-hydroxyacid dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
 
 0.683
bcp
Acetylpolyamine aminohydrolase.
  
  0.675
hdaH
Histone deacetylase-like amidohydrolase.
  
  0.675
suhB
Inositol-1-monophosphatase.
  
 
 0.665
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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