STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lery_0192TPR repeat containing protein. (302 aa)    
Predicted Functional Partners:
Lery_0191
Hypothetical protein.
     0.994
Lery_0193
KQDN repeat-containing protein.
 
 
 0.955
Lery_0188
Hypothetical protein.
 
    0.948
Lery_0190
Hypothetical protein.
   
 0.948
Lery_0189
Hypothetical protein.
 
     0.947
moxR
Methanol dehydrogenase regulatory protein.
 
     0.886
Lery_1256
Glycosyltransferase, family 2.
  
 0.862
Lery_0194
Amidase; Belongs to the amidase family.
   
   0.785
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
   
  0.771
Lery_2143
Sensory histidine-kinase / response regulator.
   
 0.738
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.