STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lery_0200Carboxylesterase. (264 aa)    
Predicted Functional Partners:
vacB
Exoribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.
  
    0.655
Lery_0199
Hypothetical protein.
       0.603
Lery_1280
Hypothetical protein.
  
     0.556
Lery_0198
Hypothetical protein.
  
     0.539
lvrA_1
Legionella vir region protein.
  
     0.539
Lery_2531
Putative membrane protein YdgA-like protein.
  
     0.521
Lery_0474
Protein IcmE (DotG).
  
     0.500
Lery_0616
DotA.
  
     0.481
Lery_2746
Cysteine protease.
  
     0.462
Lery_0201
Hypothetical protein.
       0.461
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.