Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lery_0232Osmotically inducible protein Y. (202 aa)    
Predicted Functional Partners:
Lery_1379
Transmembrane protein.
  
    0.837
yjbJ_1
Stress response protein; Belongs to the UPF0337 (CsbD) family.
 
    0.784
yjbJ_2
Stress response protein; Belongs to the UPF0337 (CsbD) family.
 
    0.784
Lery_1051
Bifunctional PutA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
  0.687
Lery_0231
PRC-barrel domain protein.
       0.618
pagP
Lipid A palmitoyltransferase PagP precursor; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors.
  
     0.560
wrbA_1
Flavoprotein WrbA (Trp repressor binding protein); Belongs to the WrbA family.
   
    0.500
wrbA_2
Flavoprotein WrbA (Trp repressor binding protein).
   
    0.500
Lery_1494
Intracellular protease, ThiJ/PfpI family.
   
    0.473
hutG
Formiminoglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family.
     
  0.433
Your Current Organism:
Legionella erythra
NCBI taxonomy Id: 448
Other names: ATCC 35303, CCUG 29667, CIP 103843, DSM 17644, JCM 7564, L. erythra, NCTC 11977, strain SE-32A-C8
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